BioImageArchive BinderHub

BinderHub allows users to share reproducible interactive computing environments from code repositories.

Quick start

  Reading Biostudies images

  Splinedist

  Some IDR studies are availiable

  Vs Code on Binderhub

  ImJoy Hybrid Desktop

Experimental Features

  IC50 Notebook for SARS-CoV-2 Data

  BIA Explorer Visualisation Notebook

Additional Resources

• IDR Screen Data: IDR Screen 2451
• S-BSST522 Image Gallery: EBI Image Gallery
• BIA Explorer GitHub Repository: GitHub - BIA Explorer
• BIA Training Repository: GitHub - BIA Training
• BIA BMZ Integration: GitHub - BIA BMZ Integration
• BioImage Archive Notebooks: GitHub - BioImage Archive Notebooks

Services and capabilities

Tier	URL	Flavour	Resources
1	binder.bioimagearchive.org	Public Binderhub	8Gb RAM, 4 vCPUs, Ephemeral
2	login.binder.bioimagearchive.org	Persistent JupyterHub	<16Gb RAM, <8 vCPUs, 15 GB Storage, Dask